Publications

2023 | 2022 | 2021 | 2020 | 2019 | 2018 | 2017 | 2016 | 2015 | 2014 | 2013

2023

(1)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. RUSKOVÁ, Renáta** - RAČKO, Dušan**. Knot formation on DNA pushed inside chiral nanochannels. In Polymers : Open Access Polymer Science Journal, 2023, vol. 15, art.no. 4185, [18] p. (2022: 5 - IF, Q1 - JCR, 0.72 - SJR, Q1 - SJR). ISSN 2073-4360. Dostupné na: https://doi.org/10.3390/polym15204185 Typ: ADCA

2022

(1)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. RUSKOVÁ, Renáta - RAČKO, Dušan**. Knot factories with helical geometry enhance knotting and induce handedness to knots. In Polymers : Open Access Polymer Science Journal, 2022, vol. 14, no. 19, art.no. 4201, [22] p. (2021: 4.967 - IF, Q1 - JCR, 0.726 - SJR, Q1 - SJR). ISSN 2073-4360. Dostupné na: https://doi.org/10.3390/polym14194201 Typ: ADCA

2021

(2)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. RUSKOVÁ, Renáta - RAČKO, Dušan**. Channels with helical modulation display stereospecific sensitivity for chiral superstructures. In Polymers : Open Access Polymer Science Journal, 2021, vol. 13, art. no. 3726, [25] p. (2020: 4.329 - IF, Q1 - JCR, 0.770 - SJR, Q1 - SJR). ISSN 2073-4360. Dostupné na: https://doi.org/10.3390/polym13213726 Typ: ADCA
  2. RUSKOVÁ, Renáta - RAČKO, Dušan**. Entropic competition between supercoiled and torsionally relaxed chromatin fibers drives loop extrusion through pseudo-topologically bound cohesin. In Biology-Basel, 2021, vol. 10, no. 2, art. no. 130, [15] p. (2020: 5.079 - IF, Q1 - JCR, 1.731 - SJR, Q1 - SJR). ISSN 2079-7737. Dostupné na: https://doi.org/10.3390/biology10020130 Typ: ADCA

2020

(1)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. CAPPONI, Sara - ALVAREZ, Fernando - RAČKO, Dušan**. Free volume in a PVME polymer - Water solution. In Macromolecules, 2020, vol. 53, no. 12, p. 4770-4782. (2019: 5.918 - IF, Q1 - JCR, 2.064 - SJR, Q1 - SJR, karentované - CCC). (2020 - Current Contents). ISSN 0024-9297. Dostupné na: https://doi.org/10.1021/acs.macromol.0c00472 Typ: ADCA

2019

(1)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. RAČKO, Dušan - BENEDETTI, Fabrizio - DORIER, Julian - STASIAK, Andrzej**. Are TADs supercoiled? In Nucleic acids research, 2019, vol. 47, no. 2, p. 521-532. (2018: 11.147 - IF, Q1 - JCR, 8.636 - SJR, Q1 - SJR, karentované - CCC). (2019 - Current Contents). ISSN 0305-1048. Dostupné na: https://doi.org/10.1093/nar/gky1091 Typ: ADCA

2018

(3)

ABC Kapitoly vo vedeckých monografiách vydané v zahraničných vydavateľstvách
  1. BENEDETTI, Fabrizio - RAČKO, Dušan - DORIER, Julien - STASIAK, Andrzej. Introducing supecoiling into models of chromosome structure. In Modeling the 3D Conformation of Genomes. 1. vyd. - [S. l.] : CRC Press, 2018, p. 115-138. ISBN 978-1-13850-079-2. Typ: ABC
ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. RAČKO, Dušan* - BENEDETTI, Fabrizio - DORIER, Julien - STASIAK, Andrzej**. Transcription-induced supercoiling as the driving force of chromatin loop extrusion during formation of TADs in interphase chromosomes. In Nucleic acids research, 2018, vol. 46, no. 4, p. 1648-1660. (2017: 11.561 - IF, Q1 - JCR, 9.025 - SJR, Q1 - SJR, karentované - CCC). (2018 - Current Contents). ISSN 0305-1048. Dostupné na: https://doi.org/10.1093/nar/gkx1123 Typ: ADCA
  2. RAČKO, Dušan* - BENEDETTI, Fabrizio* - GOUNDAROULIS, Dimos - STASIAK, Andrzej**. Chromatin loop extrusion and chromatin unknotting. In Polymers : Open Access Polymer Science Journal, 2018, vol. 10, iss. 10, art. no. 1126. (2017: 2.935 - IF, Q1 - JCR, 0.852 - SJR, Q1 - SJR, karentované - CCC). (2018 - Current Contents). ISSN 2073-4360. Dostupné na: https://doi.org/10.3390/polym10101126 Typ: ADCA

2017

(2)

ABC Kapitoly vo vedeckých monografiách vydané v zahraničných vydavateľstvách
  1. RAČKO, Dušan - BENEDETTI, Fabrizio - DORIER, Julien - BURNIER, Yannis - STASIAK, Andrzej. Molecular dynamics simulation of supercoiled, knotted, and catenated DNA molecules, including modeling of action of DNA gyrase. In The Bacterial Nucleoid: Methods and Protocols. Vol. 1624. - Springer Science+Business Media LLC, 2017, p. 339-372. ISBN 978-1-4939-7098-8. Typ: ABC
ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. BENEDETTI, Fabrizio - RAČKO, Dušan - DORIER, Julien - BURNIER, Yannis - STASIAK, Andrzej. Transcription-induced supercoiling explains formationof self-interacting chromatin domains in S. pombe. In Nucleic acids research, 2017, vol. 45, no. 17, p. 9850-9859. (2016: 10.162 - IF, Q1 - JCR, 7.883 - SJR, Q1 - SJR, karentované - CCC). (2017 - Current Contents). ISSN 0305-1048. Dostupné na: https://doi.org/10.1093/nar/gkx716 Typ: ADCA

2016

(1)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. RAWDON, Eric J. - DORIER, Julien - RAČKO, Dušan - MILLETT, Kenneth C. - STASIAK, Andrzej. How topoisomerase IV can efficiently unknot and decatenate negatively supercoiled DNA molecules without causing their torsional relaxation. In Nucleic acids research, 2016, vol. 44, no. 10, p. 4528-4538. (2015: 9.202 - IF, Q1 - JCR, 7.358 - SJR, Q1 - SJR, karentované - CCC). (2016 - Current Contents). ISSN 0305-1048. Dostupné na: https://doi.org/10.1093/nar/gkw311 Typ: ADCA

2015

(4)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. BENEDETTI, Fabrizio - JAPARIDZE, Aleksandre - DORIER, Julien - RAČKO, Dušan - KWAPICH, Robert - BURNIER, Yannis - DIETLER, Giovanni - STASIAK, Andrzej. Effects of physiological self-crowding of DNA on shape and biological properties of DNA molecules with various levels of supercoiling. In Nucleic acids research, 2015, vol. 43, no. 4, p. 2390-2399. (2014: 9.112 - IF, Q1 - JCR, 6.640 - SJR, Q1 - SJR, karentované - CCC). (2015 - Current Contents). ISSN 0305-1048. Dostupné na: https://doi.org/10.1093/nar/gkv055 Typ: ADCA
  2. RAČKO, Dušan - BENEDETTI, Fabrizio - DORIER, Julien - BURNIER, Yannis - STASIAK, Andrzej. Generation of supercoils in nicked and grapped DNA drives DNA unknotting and postreplicative decatenation. In Nucleic acids research, 2015, vol. 43, no. 15, p. 7229-7236. (2014: 9.112 - IF, Q1 - JCR, 6.640 - SJR, Q1 - SJR, karentované - CCC). (2015 - Current Contents). ISSN 0305-1048. Dostupné na: https://doi.org/10.1093/nar/gkv683 Typ: ADCA
  3. RAČKO, Dušan - CIFRA, Peter. Arm retraction and escape transition in semi-flexible star polymer under cylindrical confinement. In Journal of molecular modeling, 2015, vol. 21, art.no. 186. (2014: 1.736 - IF, Q2 - JCR, 0.510 - SJR, Q2 - SJR, karentované - CCC). (2015 - Current Contents). ISSN 1610-2940. Dostupné na: https://doi.org/10.1007/s00894-015-2735-9 Typ: ADCA
ADMB Vedecké práce v zahraničných neimpaktovaných časopisoch registrovaných v databázach Web of Science alebo SCOPUS
  1. CZANIKOVÁ, Klaudia - KRUPA, Igor - RAČKO, Dušan - ŠMATKO, Vasilij - CAMPO, Eva M. - PAWLOVA, Eva - OMASTOVÁ, Mária. In situ electron microscopy of Braille microsystems: photoactuation of ethylene vinyl acetate/carbon nanotube composites. In Materials Research Express, 2015, vol. 2, art.no. 025601. (2015 - SCOPUS). ISSN 2053-1591. Dostupné na: https://doi.org/10.1088/2053-1591/2/2/025601 Typ: ADMB

2014

(1)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. RAČKO, Dušan. The free volume of condensed phases confined in a nanopore as seen by computer simulations and compared to PALS. In Acta Physica Polonica A, 2014, vol. 125, no. 3, p. 785-788. (2013: 0.604 - IF, Q4 - JCR, 0.345 - SJR, karentované - CCC). (2014 - Current Contents, WOS, SCOPUS). ISSN 1898-794X. Dostupné na: https://doi.org/10.12693/APhysPolA.125.785 Typ: ADCA

2013

(5)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. CZANIKOVÁ, Klaudia - TORRAS, Núria - ESTEVE, Jaume - KRUPA, Igor - KASÁK, Peter - PAVLOVA, Ewa - RAČKO, Dušan - CHODÁK, Ivan - OMASTOVÁ, Mária. Nanocomposite photoactuators based on an ethylene vinyl acetate copolymer filled with carbon nanotubes. In Sensors and Actuators B-Chemical, 2013, vol. 186, p. 701 - 710. (2012: 3.535 - IF, Q1 - JCR, 1.412 - SJR, Q1 - SJR, karentované - CCC). (2013 - Current Contents). ISSN 0925-4005. Dostupné na: https://doi.org/10.1016/j.snb.2013.06.054 Typ: ADCA
  2. DANKO, Martin - ANDICSOVÁ, Anita - HRDLOVIČ, Pavol - RAČKO, Dušan - VÉGH, Daniel. Spectral characteristics of carbonyl substituted 2,2´-bithiophenes in polymer matrices and low polar solvents. In Photochemical and Photobiological Sciences, 2013, vol. 12, p. 1210 - 1219. (2012: 2.923 - IF, Q2 - JCR, 1.060 - SJR, Q2 - SJR, karentované - CCC). (2013 - Current Contents). ISSN 1474-905X. Dostupné na: https://doi.org/10.1039/c3pp50049g Typ: ADCA
  3. RAČKO, Dušan - CIFRA, Peter. Segregation of semiflexible macromolecules in nanochannel. In Journal of Chemical Physics, 2013, vol. 138, art.no. 184904. (2012: 3.164 - IF, Q1 - JCR, 1.832 - SJR, Q1 - SJR, karentované - CCC). (2013 - Current Contents). ISSN 0021-9606. Dostupné na: https://doi.org/10.1063/1.4803674 Typ: ADCA
ADMB Vedecké práce v zahraničných neimpaktovaných časopisoch registrovaných v databázach Web of Science alebo SCOPUS
  1. RAČKO, Dušan - KRIŠTIAK, Jozef. The free volume dynamics. In Materials Science Forum, 2013, vol. 733, p. 33 - 37. (2013 - WOS, SCOPUS). ISSN 0255-5476. Dostupné na: https://doi.org/10.4028/www.scientific.net/MSF.733.33 Typ: ADMB
  2. RAČKO, Dušan. On the relatioship of the relative intensity I3 and a cavity number as obtained from computer simulations. In Materials Science Forum, 2013, vol. 733, p. 183-189. (2013 - WOS, SCOPUS). ISSN 0255-5476. Dostupné na: https://doi.org/10.4028/www.scientific.net/MSF.733.183 Typ: ADMB