Publications

2023 | 2022 | 2021 | 2020 | 2019 | 2018 | 2017 | 2016 | 2015 | 2013 | 2012

2023

(1)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. CIFRA, Peter - BLEHA, Tomáš**. Pressure of linear and ring polymers confined in a cavity. In Journal of Physical Chemistry B, 2023, vol. 127, p. 4646-4657. (2022: 3.3 - IF, Q3 - JCR, 0.795 - SJR, Q1 - SJR). ISSN 1520-6106. Dostupné na: https://doi.org/10.1021/acs.jpcb.3c01585 Typ: ADCA

2022

(1)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. BLEHA, Tomáš** - CIFRA, Peter. Energy/entropy partition of force at DNA stretching. In Biopolymers, 2022, vol. 113, no. 5, e23487, [8] p. (2021: 2.240 - IF, Q3 - JCR, 0.508 - SJR, Q2 - SJR). ISSN 0006-3525. Dostupné na: https://doi.org/10.1002/bip.23487 Typ: ADCA

2021

(1)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. CIFRA, Peter** - BLEHA, Tomáš. Piston compression of semiflexible ring polymers in channels. In Macromolecular Theory and Simulations, 2021, vol. 30, art. no. 2100027, [11] p. (2020: 1.530 - IF, Q4 - JCR, 0.370 - SJR, Q2 - SJR). ISSN 1022-1344. Dostupné na: https://doi.org/10.1002/mats.202100027 Typ: ADCA

2020

(2)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. BENKOVÁ, Zuzana** - RIŠPANOVÁ, Lucia - CIFRA, Peter. Conformation of flexible and semiflexible chains confined in nanoposts array of various geometries. In Polymers : Open Access Polymer Science Journal, 2020, vol. 12, no. 5, art. no. 1064, [19] p. (2019: 3.426 - IF, Q1 - JCR, 0.704 - SJR, Q1 - SJR, karentované - CCC). (2020 - Current Contents). ISSN 2073-4360. Dostupné na: https://doi.org/10.3390/POLYM12051064 Typ: ADCA
  2. BLEHA, Tomáš - CIFRA, Peter**. Compression and stretching of single DNA molecules under channel confinement. In Journal of Physical Chemistry B, 2020, vol. 124, no. 9, p. 1691-1702. (2019: 2.857 - IF, Q2 - JCR, 0.943 - SJR, Q1 - SJR, karentované - CCC). (2020 - Current Contents, WOS, SCOPUS). ISSN 1520-6106. Dostupné na: https://doi.org/10.1021/acs.jpcb.9b11602 Typ: ADCA

2019

(1)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. BLEHA, Tomáš** - CIFRA, Peter. Force-displacement relations at compression of dsDNA macromolecules. In Journal of Chemical Physics, 2019, vol. 151, art.no. 014901, [10]p. (2018: 2.997 - IF, Q2 - JCR, 1.159 - SJR, Q1 - SJR, karentované - CCC). (2019 - Current Contents). ISSN 0021-9606. Dostupné na: https://doi.org/10.1063/1.5099522 Typ: ADCA

2018

(3)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. BLEHA, Tomáš** - CIFRA, Peter. Correlation anisotrophy and stiffness of DNA molecules confined in nanochannels. In Journal of Chemical Physics, 2018, vol. 149, iss. 5, art. no. 054903. (2017: 2.843 - IF, Q2 - JCR, 1.252 - SJR, Q1 - SJR, karentované - CCC). (2018 - Current Contents). ISSN 0021-9606. Dostupné na: https://doi.org/10.1063/1.5034219 Typ: ADCA
  2. BLEHA, Tomáš** - CIFRA, Peter. Stretching and compression of DNA by external forces under nanochannel confinement. In Soft Matter, 2018, vol. 14, p. 1247-1259. (2017: 3.709 - IF, Q1 - JCR, 1.493 - SJR, Q1 - SJR, karentované - CCC). (2018 - Current Contents, WOS, SCOPUS). ISSN 1744-683X. Dostupné na: https://doi.org/10.1039/c7sm02413d Typ: ADCA
  3. RIŠPANOVÁ, Lucia - BENKOVÁ, Zuzana - CIFRA, Peter**. Block-copolymer of flexible and semi-flexible block confined in nanopost array. In Polymers : Open Access Polymer Science Journal, 2018, vol. 10, no. 12, art. no. 1301. (2017: 2.935 - IF, Q1 - JCR, 0.852 - SJR, Q1 - SJR, karentované - CCC). (2018 - Current Contents). ISSN 2073-4360. Dostupné na: https://doi.org/10.3390/polym10121301 Typ: ADCA

2017

(2)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. BENKOVÁ, Zuzana - RIŠPANOVÁ, Lucia - CIFRA, Peter. Effect of chain stiffness for semiflexible macromolecules in array of cylindrical nanoposts. In Journal of Chemical Physics, 2017, vol. 147, art. no. 134907. (2016: 2.965 - IF, Q2 - JCR, 1.486 - SJR, Q1 - SJR, karentované - CCC). (2017 - Current Contents, WOS, SCOPUS). ISSN 0021-9606. Dostupné na: https://doi.org/10.1063/1.4991649 Typ: ADCA
  2. BENKOVÁ, Zuzana - RIŠPANOVÁ, Lucia - CIFRA, Peter. Structural behavior of a semiflexible polymer chain in an array of nanoposts. In Polymers : Open Access Polymer Science Journal, 2017, vol. 9, no. 8, art. no. 313. (2016: 3.364 - IF, Q1 - JCR, 0.977 - SJR, Q1 - SJR, karentované - CCC). (2017 - Current Contents). ISSN 2073-4360. Dostupné na: https://doi.org/10.3390/polym9080313 Typ: ADCA

2016

(1)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. BENKOVÁ, Zuzana - NÁMER, Pavol - CIFRA, Peter. Comparison of a stripe and slab confinement for ring and linear macromolecules in nanochannel. In Soft Matter, 2016, vol. 12, no. 40, p. 8425-8439. (2015: 3.798 - IF, Q1 - JCR, 1.634 - SJR, Q1 - SJR, karentované - CCC). (2016 - Current Contents). ISSN 1744-683X. Dostupné na: https://doi.org/10.1039/c6sm01507g Typ: ADCA

2015

(3)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. BENKOVÁ, Zuzana - NÁMER, Pavol - CIFRA, Peter. Stripe to slab confinement for the linearization of macromolecules in nanochannels. In Soft Matter, 2015, vol. 11, p. 2279-2289. (2014: 4.029 - IF, Q1 - JCR, 1.742 - SJR, Q1 - SJR, karentované - CCC). (2015 - Current Contents). ISSN 1744-683X. Dostupné na: https://doi.org/10.1039/c4sm02382j Typ: ADCA
  2. PLAŠIENKA, Dušan - CIFRA, Peter - MARTOŇÁK, Roman. Structural transformation between long and short-chain form of liquid sulfur from ab initio molecular dynamics. In Journal of Chemical Physics, 2015, vol. 142, art. no. 154502. (2014: 2.952 - IF, Q1 - JCR, 1.446 - SJR, Q1 - SJR, karentované - CCC). (2015 - Current Contents). ISSN 0021-9606. Dostupné na: https://doi.org/10.1063/1.4917040 Typ: ADCA
  3. RAČKO, Dušan - CIFRA, Peter. Arm retraction and escape transition in semi-flexible star polymer under cylindrical confinement. In Journal of molecular modeling, 2015, vol. 21, art.no. 186. (2014: 1.736 - IF, Q2 - JCR, 0.510 - SJR, Q2 - SJR, karentované - CCC). (2015 - Current Contents). ISSN 1610-2940. Dostupné na: https://doi.org/10.1007/s00894-015-2735-9 Typ: ADCA

2013

(2)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. BENKOVÁ, Zuzana - CIFRA, Peter. Comparison of linear and ring DNA macromolecules moderately and strongly confined in nanochannels. In Biochemical society transactions, 2013, vol. 41, p.625 -629. (2012: 2.587 - IF, Q3 - JCR, 2.087 - SJR, Q1 - SJR, karentované - CCC). (2013 - Current Contents). ISSN 0300-5127. Dostupné na: https://doi.org/10.1042/BST20120279 Typ: ADCA
  2. RAČKO, Dušan - CIFRA, Peter. Segregation of semiflexible macromolecules in nanochannel. In Journal of Chemical Physics, 2013, vol. 138, art.no. 184904. (2012: 3.164 - IF, Q1 - JCR, 1.832 - SJR, Q1 - SJR, karentované - CCC). (2013 - Current Contents). ISSN 0021-9606. Dostupné na: https://doi.org/10.1063/1.4803674 Typ: ADCA

2012

(5)

ADCA Vedecké práce v zahraničných karentovaných časopisoch – impaktovaných
  1. BENKOVÁ, Zuzana - CIFRA, Peter. Simulation of semiflexible cyclic and linear chains moderately and strongly confined in nanochannels. In Macromolecules, 2012, vol. 45, p. 2597 - 2608. (2011: 5.167 - IF, Q1 - JCR, 2.556 - SJR, Q1 - SJR, karentované - CCC). (2012 - Current Contents). ISSN 0024-9297. Dostupné na: https://doi.org/10.1021/ma202730c Typ: ADCA
  2. CIFRA, Peter - BLEHA, Tomáš. Free energy of polymers confined in open and closed cavities. In Macromolecular Theory and Simulations, 2012, vol. 21, p. 15 - 23. (2011: 1.709 - IF, Q2 - JCR, 0.533 - SJR, Q2 - SJR, karentované - CCC). (2012 - Current Contents). ISSN 1022-1344. Dostupné na: https://doi.org/10.1002/mats.201100061 Typ: ADCA
  3. CIFRA, Peter. Weak -to-strong confinement transition of semi-flexible macromolecules in slit and in channel. In Journal of Chemical Physics, 2012, vol. 136, art.no.024902. (2011: 3.333 - IF, Q1 - JCR, 1.845 - SJR, Q1 - SJR, karentované - CCC). (2012 - Current Contents). ISSN 0021-9606. Dostupné na: https://doi.org/10.1063/1.3674304 Typ: ADCA
  4. CIFRA, Peter - BLEHA, Tomáš. Detection of chain backfolding in simulation of DNA in nanofluidic channels. In SOFT MATTER, 2012, vol. 8, p. 9022 - 9028. (2011: 4.390 - IF, Q1 - JCR, 2.007 - SJR, Q1 - SJR, karentované - CCC). (2012 - Current Contents). ISSN 1744-683X. Dostupné na: https://doi.org/10.1039/c2sm26128f Typ: ADCA
  5. REITH, Daniel - CIFRA, Peter - STASIAK, Andrzej - VIRNAU, Peter. Effective stiffening of DNA due to nematic ordering causes DNA molecules packed in phage capsids to preferentially form torus knots. In Nucleic acids research, 2012, vol. 40, iss. 11, p. 5129-5137. (2011: 8.026 - IF, Q1 - JCR, 5.976 - SJR, Q1 - SJR, karentované - CCC). (2012 - Current Contents). ISSN 0305-1048. Dostupné na: https://doi.org/10.1093/nar/gks157 Typ: ADCA